Shopify and Microsoft Dynamics NAV integration for real-time ERP sync

Connect Shopify Plus with Microsoft Dynamics NAV (formerly Navision) to sync products, pricing, inventory, customers, and orders, so fulfillment and reporting stay accurate.

Set up your integration

Trusted by 700+ leading brands worldwide

What is the Shopify + Microsoft Dynamics NAV integration

Are you still keying Shopify orders into Microsoft Dynamics NAV (formerly Navision), fixing mismatched customer details, and chasing stock that “should be there”? That manual loop slows fulfillment, skews inventory, and makes finance close feel longer than it needs to. The Shopify – Microsoft Dynamics NAV integration connects your storefront and ERP so sales, customers, and inventory updates flow between systems on an agreed source of truth. It keeps Shopify running as the selling layer while NAV (Microsoft Navision) stays the operational backbone for pricing, taxation rules, fulfillment, and accounting. This setup fits if Shopify drives online revenue, but NAV is where your team actually runs inventory, invoicing, and fulfillment.

Shopify + Microsoft Dynamics NAV integration benefits

Cut fulfillment delays by pushing Shopify orders straight into NAV workflows

Protect margin with ERP-grade pricing and tax logic in Microsoft Navision

Reduce stockouts by keeping Shopify availability aligned to NAV warehouses

Speed up finance close with clean sales and invoice data in Dynamics NAV

Lower support workload with fewer order edits and customer record fixes

Scale to higher order volume without adding admins to manage ERP updates

How the Shopify Microsoft Dynamics NAV integration works technically

• Shopify orders are imported into Microsoft Dynamics NAV as sales documents, with line items mapped to NAV Items using SKU or variant identifiers.

• Customer records are matched by email and external IDs; new customers are created in NAV when no match exists, and address fields are normalized to NAV formats.

• Inventory levels are synchronized from NAV to Shopify per location/warehouse mapping, with reservations and backorders handled according to NAV availability logic.

• Product master data can be exported from NAV to Shopify, including titles, SKUs, barcodes, prices, and variant options, with field-level mapping rules.

• Tax, currency, and discount amounts are carried on order import as order-level and line-level values, with reconciliation fields stored for auditability.

• Sync jobs run on schedules and/or event triggers, support delta updates for changed records, and write error logs with retriable failed messages.

Why choose scandiweb to handle Shopify integration for you?

Shopify Plus team used to ERP-heavy stacks

We’ve delivered 50+ Shopify projects and know the edge cases that appear when ERP rules meet storefront speed.

Integration design that prevents costly rework

We map data ownership, IDs, and sync rules up front, so Shopify and Microsoft Dynamics NAV (formerly Navision) stay consistent.

Clean middleware and API-first sync patterns

Our engineers build integration layers that are testable, observable, and easy to extend as NAV and apps evolve.

Data, QA, and release process built-in

Each release includes scenario-based testing, logging, and rollback planning, reducing integration bugs after go-live.

Cross-team coverage beyond “just the connector”

You get dev, QA, analytics, and UX on one team, so Microsoft Navision changes don’t break tracking or UX flows.

A partner with scale and long-term stability

Since 2003, scandiweb has delivered 2,100+ projects with 600+ specialists, so you’re not dependent on a few people.

Frequently Asked Questions about Shopify Microsoft Dynamics NAV integration

How do you integrate Shopify Plus with Microsoft Dynamics NAV (formerly Navision) for real-time inventory and pricing sync?

We connect Shopify to NAV through API or middleware, then map SKUs, warehouses, price lists, and tax logic. Updates can run near real time or on scheduled jobs, depending on load and ERP rules.

Which data objects can be synced between Shopify and Microsoft Navision in an ERP integration?

Typical flows include products, variants, inventory by location, price tiers, customers, orders, invoices, shipments, and refunds. The exact scope depends on how your NAV instance models sales, posting groups, and item cards.

Can a Shopify and Microsoft Dynamics NAV integration support multiple warehouses, locations, and markets?

Yes, we can sync per-warehouse stock, market-specific pricing, and localized tax setup, then route orders to the right fulfillment location. The key is clear source-of-truth rules for inventory and pricing per market.

How do you prevent overselling and stock mismatches with Shopify plus Microsoft Dynamics NAV (formerly Navision)?

We use a single inventory authority, fast stock reservations, and retry-safe sync to keep quantities consistent. We also add monitoring for failed jobs so issues get fixed before they hit customers.

How long does a Shopify plus Microsoft Dynamics NAV integration project usually take?

Most timelines depend on customizations in NAV, the number of price and warehouse rules, and whether you need historical data migration. scandiweb has delivered 50+ Shopify projects, so we scope integrations in practical phases and ship in iterations.

Explore related Shopify ERP integrations

Start your Shopify + Microsoft Dynamics NAV integration

1. Submit your integration request

Fill out the form and share your integration requirements.

2. Join a free strategy & discovery call

Join a 60-minute session with our Shopify integration specialists.
We’ll review your business systems, identify key challenges, and uncover actionable opportunities.